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CAZyme Information: EPrPVT00000024440-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytopythium vexans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans | |||||||||||
| CAZyme ID | EPrPVT00000024440-p1 | |||||||||||
| CAZy Family | GT8 | |||||||||||
| CAZyme Description | Choline dehydrogenase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 39 | 356 | 3.5e-109 | 0.5669014084507042 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 6.00e-179 | 39 | 357 | 5 | 314 | choline dehydrogenase; Validated |
| 225186 | BetA | 2.44e-110 | 39 | 359 | 7 | 320 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 366272 | GMC_oxred_N | 1.23e-60 | 112 | 342 | 15 | 216 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 215420 | PLN02785 | 1.26e-21 | 7 | 341 | 27 | 326 | Protein HOTHEAD |
| 240384 | PTZ00367 | 5.29e-04 | 39 | 76 | 33 | 72 | squalene epoxidase; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.12e-147 | 4 | 361 | 1 | 343 | |
| 2.37e-126 | 16 | 360 | 47 | 385 | |
| 4.93e-126 | 39 | 360 | 24 | 339 | |
| 3.40e-125 | 28 | 360 | 8 | 334 | |
| 1.16e-99 | 42 | 357 | 35 | 345 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.33e-58 | 29 | 360 | 7 | 330 | Crystal structure of pyridoxine 4-oxidase from Mesorbium loti [Mesorhizobium loti] |
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| 1.59e-57 | 41 | 360 | 3 | 314 | Crystal structure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti] |
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| 1.22e-54 | 39 | 341 | 7 | 305 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 1.22e-54 | 39 | 341 | 7 | 305 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 1.22e-54 | 39 | 341 | 7 | 305 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.59e-129 | 1 | 360 | 1 | 360 | Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1 |
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| 1.76e-127 | 10 | 360 | 16 | 355 | Choline dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=CHDH PE=1 SV=2 |
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| 2.98e-126 | 39 | 360 | 42 | 357 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
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| 2.27e-100 | 39 | 357 | 4 | 316 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=betA PE=3 SV=1 |
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| 4.06e-100 | 39 | 361 | 4 | 320 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000059 | 0.000003 |