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CAZyme Information: EPrPVT00000024367-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytopythium vexans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans | |||||||||||
| CAZyme ID | EPrPVT00000024367-p1 | |||||||||||
| CAZy Family | GT8 | |||||||||||
| CAZyme Description | Pectin lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 93 | 244 | 1.9e-43 | 0.8342245989304813 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 1.42e-15 | 91 | 232 | 2 | 151 | Amb_all domain. |
| 226384 | PelB | 1.11e-04 | 109 | 166 | 101 | 165 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.59e-88 | 1 | 253 | 32 | 297 | |
| 9.00e-88 | 1 | 253 | 32 | 297 | |
| 1.68e-86 | 12 | 253 | 134 | 388 | |
| 1.49e-83 | 1 | 253 | 32 | 297 | |
| 3.09e-83 | 1 | 232 | 32 | 274 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.10e-32 | 4 | 232 | 15 | 240 | Pectin Lyase A [Aspergillus niger] |
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| 2.94e-32 | 4 | 232 | 15 | 240 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 3.05e-30 | 4 | 232 | 15 | 240 | Pectin Lyase B [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.34e-39 | 4 | 232 | 34 | 259 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
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| 8.34e-39 | 2 | 236 | 31 | 266 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 8.34e-39 | 2 | 236 | 31 | 266 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 1.48e-38 | 2 | 232 | 30 | 261 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 1.48e-38 | 2 | 232 | 30 | 261 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000040 | 0.000001 |