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CAZyme Information: EPrPVT00000021438-p1

You are here: Home > Sequence: EPrPVT00000021438-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000021438-p1
CAZy Family GH78
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
272 PvexDAOMBR484_SC0663|CGC1 29691.05 4.2344
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPVT00000021438-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 14 250 6.2e-52 0.9020408163265307

CDD Domains      help

EPrPVT00000021438-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.45e-35 24 210 20 208
2.09e-34 7 207 6 206
7.01e-33 24 204 16 195
3.19e-32 24 208 30 214
1.17e-31 7 208 4 205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.02e-12 27 200 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPVT00000021438-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000766 0.999226 CS pos: 26-27. Pr: 0.9622

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000021438-p1.