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CAZyme Information: EPrPVT00000019278-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytopythium vexans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans | |||||||||||
| CAZyme ID | EPrPVT00000019278-p1 | |||||||||||
| CAZy Family | GH31 | |||||||||||
| CAZyme Description | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE11 | 8 | 301 | 2.8e-62 | 0.9077490774907749 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397424 | LpxC | 1.58e-100 | 2 | 302 | 1 | 271 | UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. |
| 237294 | lpxC | 7.04e-92 | 1 | 308 | 3 | 280 | UDP-3-O-acyl-N-acetylglucosamine deacetylase. |
| 223845 | LpxC | 2.47e-74 | 1 | 309 | 3 | 284 | UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell wall/membrane/envelope biogenesis]. |
| 273014 | lpxC | 3.07e-54 | 1 | 308 | 2 | 279 | UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| 237296 | PRK13188 | 1.22e-53 | 1 | 300 | 4 | 298 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.25e-48 | 198 | 307 | 3 | 110 | |
| 8.49e-46 | 11 | 308 | 29 | 282 | |
| 1.68e-45 | 9 | 309 | 28 | 283 | |
| 2.36e-45 | 9 | 309 | 28 | 283 | |
| 2.36e-45 | 9 | 309 | 28 | 283 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.65e-42 | 9 | 303 | 30 | 279 | Pseudomonas aeruginosa LpxC in complex with CHIR-090 [Pseudomonas aeruginosa PAO1] |
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| 1.01e-41 | 9 | 303 | 28 | 277 | Pseudomonas aeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1],4J3D_B Pseudomonas aeruginosa LpxC in complex with a hydroxamate inhibitor [Pseudomonas aeruginosa PAO1] |
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| 1.06e-41 | 9 | 303 | 28 | 277 | Pseudomonas aeruginosa LpxC in complex with NVS-LPXC-01 [Pseudomonas aeruginosa PAO1],5U3B_B Pseudomonas aeruginosa LpxC in complex with NVS-LPXC-01 [Pseudomonas aeruginosa PAO1],6MAE_A CHAIN A. UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase PA-LPXC Complexed with (R)-3-((S)-3-(4-(cyclopropylethynyl)phenyl)-2-oxooxazolidin-5-yl)-N-hydroxy-2-methyl-2-(methylsulfonyl)propenamide [Pseudomonas aeruginosa PAO1] |
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| 1.17e-41 | 9 | 303 | 28 | 277 | Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor 19 [Pseudomonas aeruginosa PAO1],7K99_C Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor 19 [Pseudomonas aeruginosa PAO1],7K9A_A Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor [Pseudomonas aeruginosa PAO1],7K9A_C Crystal Structure of P. aeruginosa LpxC with N-Hydroxyformamide inhibitor [Pseudomonas aeruginosa PAO1] |
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| 1.17e-41 | 9 | 303 | 32 | 281 | Co-Crystal structure of P. aeruginosa LpxC-50067 complex [Pseudomonas aeruginosa PAO1] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.75e-44 | 5 | 300 | 24 | 274 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Thiobacillus denitrificans (strain ATCC 25259) OX=292415 GN=lpxC PE=3 SV=1 |
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| 1.44e-42 | 9 | 303 | 28 | 277 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) OX=351746 GN=lpxC PE=3 SV=1 |
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| 1.44e-42 | 9 | 303 | 28 | 277 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=lpxC PE=3 SV=1 |
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| 1.44e-42 | 9 | 303 | 28 | 277 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Pseudomonas putida (strain GB-1) OX=76869 GN=lpxC PE=3 SV=1 |
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| 4.41e-42 | 9 | 308 | 28 | 286 | UDP-3-O-acyl-N-acetylglucosamine deacetylase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) OX=296591 GN=lpxC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999714 | 0.000326 |