logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPVT00000019277-p1

You are here: Home > Sequence: EPrPVT00000019277-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000019277-p1
CAZy Family GH31
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 34648.67 3.7942
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPVT00000019277-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 268 1.3e-74 0.9673469387755103

CDD Domains      help

EPrPVT00000019277-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.09e-86 1 208 1 208
7.65e-84 1 211 1 212
7.89e-84 1 211 1 212
1.23e-83 1 211 1 212
4.48e-83 1 211 1 212

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.18e-11 100 195 70 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPVT00000019277-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.002392 0.997607 CS pos: 23-24. Pr: 0.9635

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000019277-p1.