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CAZyme Information: EPrPVT00000018556-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phytopythium vexans | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans | |||||||||||
| CAZyme ID | EPrPVT00000018556-p1 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Pectin lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 52 | 171 | 1.2e-46 | 0.6363636363636364 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 3.66e-17 | 13 | 172 | 2 | 189 | Amb_all domain. |
| 226384 | PelB | 0.001 | 14 | 176 | 84 | 280 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.66e-75 | 1 | 222 | 201 | 459 | |
| 4.67e-75 | 1 | 222 | 110 | 368 | |
| 7.45e-71 | 1 | 240 | 110 | 387 | |
| 2.96e-70 | 1 | 237 | 110 | 384 | |
| 6.02e-67 | 1 | 233 | 110 | 387 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.45e-38 | 9 | 216 | 88 | 325 | Pectin Lyase A [Aspergillus niger] |
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| 1.57e-36 | 9 | 216 | 88 | 325 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 4.68e-34 | 12 | 237 | 91 | 346 | Pectin Lyase B [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.86e-47 | 7 | 215 | 108 | 347 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 7.86e-47 | 7 | 215 | 108 | 347 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 1.78e-44 | 12 | 215 | 110 | 343 | Probable pectin lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelB PE=3 SV=2 |
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| 2.50e-44 | 5 | 214 | 104 | 343 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 4.10e-43 | 12 | 210 | 110 | 339 | Pectin lyase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pelB PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000044 | 0.000005 |