logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPVT00000017005-p1

You are here: Home > Sequence: EPrPVT00000017005-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000017005-p1
CAZy Family GH16
CAZyme Description Beta-D-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
780 84396.19 5.7952
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37:92 3.2.1.55:39 3.2.1.21:1 3.2.1.6:1 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 71 325 1.3e-67 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178629 PLN03080 0.0 28 759 32 777
Probable beta-xylosidase; Provisional
185053 PRK15098 1.50e-91 106 774 118 763
beta-glucosidase BglX.
396478 Glyco_hydro_3_C 2.41e-61 396 629 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
224389 BglX 9.22e-55 95 450 71 383
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
395747 Glyco_hydro_3 4.25e-34 103 347 83 306
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.75e-207 6 752 16 765
8.75e-207 6 752 16 765
8.75e-207 6 752 16 765
1.12e-205 21 759 31 765
2.40e-205 34 752 42 771

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.65e-156 28 754 5 721
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
4.65e-156 28 754 5 721
Chain A, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
8.07e-141 28 758 32 747
GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]
1.45e-139 28 748 32 739
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
1.49e-139 28 748 32 739
Chain A, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.81e-194 17 759 38 782
Beta-D-xylosidase 4 OS=Arabidopsis thaliana OX=3702 GN=BXL4 PE=1 SV=1
8.42e-194 36 760 36 766
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
8.36e-193 23 759 39 772
Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1
1.62e-192 21 757 32 769
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1
1.49e-190 38 763 49 774
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000427 0.999547 CS pos: 24-25. Pr: 0.5678

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000017005-p1.