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CAZyme Information: EPrPVT00000014558-p1

You are here: Home > Sequence: EPrPVT00000014558-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000014558-p1
CAZy Family AA2
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
386 PvexDAOMBR484_SC0045|CGC1 42642.45 7.9672
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPVT00000014558-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 68 386 6e-57 0.6751412429378532

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
234580 lpxB 5.18e-65 9 386 1 315
lipid-A-disaccharide synthase; Reviewed
223834 LpxB 3.70e-64 9 386 1 318
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
397004 LpxB 1.07e-48 12 384 1 313
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
129319 lpxB 2.24e-31 14 386 10 321
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
237606 PRK14089 5.95e-20 79 386 74 289
lipid-A-disaccharide synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.71e-35 12 386 7 319
1.16e-34 12 386 6 320
2.40e-34 12 386 13 327
2.73e-34 11 386 6 321
6.85e-34 12 386 17 331

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.19e-21 9 383 6 318
Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
2.99e-21 9 383 6 318
Lipid A Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.38e-32 12 383 6 314
Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=lpxB PE=3 SV=1
2.09e-31 10 383 2 312
Lipid-A-disaccharide synthase OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=lpxB PE=3 SV=1
2.09e-31 10 383 2 312
Lipid-A-disaccharide synthase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=lpxB PE=3 SV=1
2.84e-31 10 383 2 312
Lipid-A-disaccharide synthase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=lpxB PE=3 SV=1
1.22e-30 12 386 3 318
Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000070 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000014558-p1.