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CAZyme Information: EPrPVT00000014202-p1

You are here: Home > Sequence: EPrPVT00000014202-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000014202-p1
CAZy Family AA17
CAZyme Description Endo-beta-1,6-galactanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
336 36492.49 5.6108
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 40 332 4.8e-100 0.6096491228070176

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 1.72e-19 43 231 16 195
O-Glycosyl hydrolase family 30.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.38e-122 16 336 18 347
2.44e-110 27 336 29 341
2.19e-106 29 336 35 346
5.20e-102 29 336 36 347
2.93e-101 41 336 38 331

PDB Hits      help

EPrPVT00000014202-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.04e-90 41 335 34 322
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
3.97e-20 24 237 34 282
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.239418 0.760539 CS pos: 26-27. Pr: 0.5268

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000014202-p1.