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CAZyme Information: EPrPVT00000014196-p1

You are here: Home > Sequence: EPrPVT00000014196-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phytopythium vexans
Lineage Oomycota; NA; ; Pythiaceae; Phytopythium; Phytopythium vexans
CAZyme ID EPrPVT00000014196-p1
CAZy Family AA17
CAZyme Description Endo-beta-1,6-galactanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
501 PvexDAOMBR484_SC0031|CGC1 53274.22 5.2004
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PvexansDAOMBR484 11991 1223560 34 11957
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 38 494 1e-138 0.9780701754385965

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 6.15e-16 41 246 16 201
O-Glycosyl hydrolase family 30.
227807 XynC 7.63e-05 169 493 124 425
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.07e-185 23 497 27 497
3.73e-158 23 498 32 496
4.65e-154 23 499 33 498
1.51e-152 23 499 33 498
1.51e-152 23 499 33 498

PDB Hits      help

EPrPVT00000014196-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.73e-124 5 444 2 420
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
2.03e-22 22 451 31 571
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000250 0.999716 CS pos: 22-23. Pr: 0.9578

TMHMM  Annotations      help

There is no transmembrane helices in EPrPVT00000014196-p1.