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CAZyme Information: EPrPRT00000026456-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium arrhenomanes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes | |||||||||||
| CAZyme ID | EPrPRT00000026456-p1 | |||||||||||
| CAZy Family | PL4 | |||||||||||
| CAZyme Description | Cellulose synthase 3. | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.12:3 |
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CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215494 | PLN02915 | 3.08e-08 | 25 | 196 | 808 | 994 | cellulose synthase A [UDP-forming], catalytic subunit |
| 215124 | PLN02195 | 6.91e-05 | 25 | 196 | 741 | 925 | cellulose synthase A |
| 281541 | Cellulose_synt | 7.87e-05 | 23 | 196 | 481 | 669 | Cellulose synthase. Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits', plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity. |
| 215239 | PLN02436 | 0.002 | 33 | 196 | 868 | 1044 | cellulose synthase A |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.27e-162 | 1 | 233 | 892 | 1124 | |
| 8.63e-147 | 1 | 233 | 894 | 1126 | |
| 9.99e-143 | 1 | 233 | 886 | 1118 | |
| 2.76e-138 | 1 | 233 | 889 | 1121 | |
| 7.21e-136 | 1 | 233 | 884 | 1116 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.20e-07 | 25 | 196 | 857 | 1041 | Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA6 PE=2 SV=1 |
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| 2.97e-06 | 29 | 196 | 817 | 999 | Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana OX=3702 GN=CESA4 PE=1 SV=1 |
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| 2.99e-06 | 29 | 196 | 862 | 1042 | Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA3 PE=2 SV=1 |
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| 7.23e-06 | 29 | 196 | 861 | 1041 | Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica OX=39946 GN=CESA5 PE=3 SV=1 |
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| 7.23e-06 | 29 | 196 | 861 | 1041 | Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica OX=39947 GN=CESA5 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999988 | 0.000014 |
TMHMM Annotations download full data without filtering help
| Start | End |
|---|---|
| 37 | 59 |
| 63 | 85 |
| 106 | 125 |
| 140 | 162 |
| 175 | 195 |
| 210 | 232 |