logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPRT00000024113-p1

You are here: Home > Sequence: EPrPRT00000024113-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium arrhenomanes
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes
CAZyme ID EPrPRT00000024113-p1
CAZy Family GT4
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
192 20183.84 7.5883
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ParrhenomanesATCC12531 13857 1223556 52 13805
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPRT00000024113-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 190 3.2e-59 0.710204081632653

CDD Domains      help

EPrPRT00000024113-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.05e-56 4 188 6 193
2.29e-55 8 188 8 193
2.29e-55 8 188 8 193
9.78e-49 3 188 6 199
9.78e-49 3 188 6 199

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.03e-13 22 188 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPRT00000024113-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000288 0.999681 CS pos: 21-22. Pr: 0.9782

TMHMM  Annotations      help

There is no transmembrane helices in EPrPRT00000024113-p1.