You are browsing environment: FUNGIDB
CAZyme Information: EPrPRT00000022037-p1
You are here: Home > Sequence: EPrPRT00000022037-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium arrhenomanes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes | |||||||||||
| CAZyme ID | EPrPRT00000022037-p1 | |||||||||||
| CAZy Family | GH72 | |||||||||||
| CAZyme Description | Polysaccharide lyase. | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL3 | 33 | 224 | 2.9e-49 | 0.979381443298969 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397360 | Pectate_lyase | 8.98e-54 | 25 | 210 | 1 | 183 | Pectate lyase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.46e-54 | 19 | 270 | 17 | 272 | |
| 2.02e-44 | 20 | 251 | 28 | 261 | |
| 3.09e-43 | 28 | 248 | 36 | 258 | |
| 3.35e-40 | 20 | 243 | 35 | 255 | |
| 5.63e-40 | 19 | 250 | 13 | 248 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.43e-11 | 43 | 165 | 11 | 131 | Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15] |
|
| 8.17e-08 | 32 | 165 | 5 | 134 | The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725] |
|
| 8.27e-08 | 32 | 165 | 6 | 135 | The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii],3T9G_B The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii] |
|
| 1.67e-07 | 32 | 165 | 14 | 143 | C. bescii Family 3 pectate lyase double mutant K108A/Q111A in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725],4YZA_B C. bescii Family 3 pectate lyase double mutant K108A/Q111A in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725] |
|
| 2.26e-07 | 32 | 165 | 14 | 143 | C. bescii Family 3 pectate lyase double mutant K108A/E39Q in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725],4YZ0_B C. bescii Family 3 pectate lyase double mutant K108A/E39Q in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.85e-39 | 43 | 244 | 42 | 240 | Probable pectate lyase G OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyG PE=3 SV=1 |
|
| 3.45e-36 | 46 | 244 | 57 | 254 | Pectate lyase H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyH PE=1 SV=1 |
|
| 4.04e-35 | 39 | 244 | 53 | 258 | Probable pectate lyase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyD PE=3 SV=1 |
|
| 3.33e-34 | 29 | 244 | 37 | 248 | Probable pectate lyase E OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=plyE PE=3 SV=1 |
|
| 4.79e-33 | 29 | 244 | 35 | 247 | Probable pectate lyase D OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999908 | 0.000148 |