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CAZyme Information: EPrPRT00000017177-p1

You are here: Home > Sequence: EPrPRT00000017177-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium arrhenomanes
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes
CAZyme ID EPrPRT00000017177-p1
CAZy Family GH28
CAZyme Description Glycoside hydrolase.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
524 55772.25 7.5010
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ParrhenomanesATCC12531 13857 1223556 52 13805
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPRT00000017177-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 34 288 5.6e-60 0.9455782312925171

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 5.41e-42 39 287 1 287
Glycosyl hydrolases family 6.
227616 CelA1 3.03e-20 62 345 166 459
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.32e-93 9 331 15 337
1.57e-92 15 331 15 327
9.35e-82 16 318 11 301
8.05e-81 18 327 19 325
1.24e-80 19 315 16 300

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.43e-27 79 314 65 317
GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
1.28e-25 56 289 40 270
CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca]
3.78e-25 84 314 73 291
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv]
3.78e-25 84 314 73 291
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with glucose-isofagomine at 1.9 angstrom [Mycobacterium tuberculosis H37Rv]
3.78e-25 84 314 73 291
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.98e-25 10 316 25 322
Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
9.50e-25 85 314 182 456
Putative endoglucanase type B OS=Fusarium oxysporum OX=5507 PE=2 SV=1
1.91e-24 5 289 17 301
Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2
6.13e-23 82 314 104 359
Probable exoglucanase GH6D OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=GH6D PE=3 SV=1
1.81e-22 69 314 157 445
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=cbhC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000255 0.999745 CS pos: 19-20. Pr: 0.9702

TMHMM  Annotations      download full data without filtering help

Start End
366 388