You are browsing environment: FUNGIDB
CAZyme Information: EPrPRT00000016305-p1
You are here: Home > Sequence: EPrPRT00000016305-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium arrhenomanes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes | |||||||||||
| CAZyme ID | EPrPRT00000016305-p1 | |||||||||||
| CAZy Family | GH16 | |||||||||||
| CAZyme Description | Polygalacturonase. | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:10 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 8 | 289 | 5e-64 | 0.8123076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.75e-65 | 1 | 290 | 15 | 310 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 3.38e-23 | 39 | 269 | 141 | 357 | polygalacturonase |
| 178580 | PLN03003 | 2.53e-20 | 39 | 266 | 115 | 337 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 4.34e-20 | 39 | 260 | 145 | 368 | Probable polygalacturonase |
| 177865 | PLN02218 | 1.83e-19 | 38 | 260 | 157 | 382 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.82e-144 | 2 | 294 | 174 | 466 | |
| 1.82e-144 | 2 | 294 | 174 | 466 | |
| 7.35e-144 | 2 | 294 | 174 | 466 | |
| 1.92e-143 | 2 | 294 | 182 | 474 | |
| 1.31e-142 | 2 | 294 | 93 | 385 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.03e-68 | 2 | 291 | 33 | 327 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
|
| 1.03e-63 | 2 | 291 | 41 | 334 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.03e-63 | 2 | 291 | 41 | 334 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
|
| 2.59e-62 | 2 | 291 | 33 | 326 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
|
| 1.42e-58 | 1 | 283 | 32 | 318 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.34e-71 | 2 | 290 | 60 | 353 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
|
| 4.57e-67 | 1 | 291 | 63 | 357 | Probable endopolygalacturonase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaI PE=3 SV=1 |
|
| 4.57e-67 | 1 | 291 | 63 | 357 | Endopolygalacturonase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaI PE=1 SV=1 |
|
| 4.57e-67 | 1 | 291 | 63 | 357 | Endopolygalacturonase B OS=Aspergillus flavus (strain ATCC MYA-384 / AF70) OX=1392242 GN=pgaB PE=2 SV=2 |
|
| 3.28e-66 | 2 | 293 | 72 | 373 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000067 | 0.000000 |