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CAZyme Information: EPrPRT00000015713-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium arrhenomanes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes | |||||||||||
| CAZyme ID | EPrPRT00000015713-p1 | |||||||||||
| CAZy Family | CE5 | |||||||||||
| CAZyme Description | Endo alpha-1,4 polygalactosaminidase. | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH114 | 29 | 186 | 2.2e-58 | 0.8263157894736842 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 397552 | Glyco_hydro_114 | 1.19e-71 | 28 | 185 | 1 | 158 | Glycoside-hydrolase family GH114. This family is recognized as a glycosyl-hydrolase family, number 114. It is endo-alpha-1,4-polygalactosaminidase, a rare enzyme. It is proposed to be TIM-barrel, the most common structure amongst the catalytic domains of glycosyl-hydrolases. |
| 226386 | COG3868 | 3.59e-27 | 14 | 174 | 55 | 215 | Predicted glycosyl hydrolase, GH114 family [Carbohydrate transport and metabolism]. |
| 367380 | DDE_1 | 2.39e-13 | 378 | 533 | 3 | 165 | DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. Interestingly this family also includes the CENP-B protein. This domain in that protein appears to have lost the metal binding residues and is unlikely to have endonuclease activity. Centromere Protein B (CENP-B) is a DNA-binding protein localized to the centromere. |
| 225219 | COG2342 | 4.93e-06 | 51 | 139 | 57 | 151 | Endo alpha-1,4 polygalactosaminidase, GH114 family (was erroneously annotated as Cys-tRNA synthetase) [Carbohydrate transport and metabolism]. |
| 197828 | CENPB | 8.35e-06 | 254 | 321 | 4 | 66 | Putative DNA-binding domain in centromere protein B, mouse jerky and transposases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.08e-59 | 17 | 199 | 79 | 261 | |
| 4.76e-59 | 3 | 185 | 9 | 199 | |
| 1.08e-58 | 8 | 185 | 15 | 198 | |
| 4.27e-57 | 21 | 183 | 251 | 413 | |
| 3.70e-56 | 21 | 199 | 30 | 209 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.92e-47 | 17 | 183 | 30 | 197 | Crystal Structure of Aspergillus fumigatus Ega3 [Aspergillus fumigatus Af293] |
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| 7.82e-47 | 17 | 183 | 47 | 214 | Crystal Structure of Aspergillus fumigatus Ega3 complex with galactosamine [Aspergillus fumigatus Af293] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.44e-25 | 297 | 542 | 299 | 564 | Pogo transposable element with KRAB domain OS=Mus musculus OX=10090 GN=Pogk PE=2 SV=2 |
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| 8.51e-25 | 297 | 542 | 299 | 564 | Pogo transposable element with KRAB domain OS=Homo sapiens OX=9606 GN=POGK PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.001979 | 0.997967 | CS pos: 19-20. Pr: 0.9642 |