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CAZyme Information: EPrPRT00000015015-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium arrhenomanes | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes | |||||||||||
| CAZyme ID | EPrPRT00000015015-p1 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Carbohydrate-binding protein. | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 | 1.1.99.18:3 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 6 | 221 | 5.7e-43 | 0.3704379562043796 |
| AA3 | 222 | 479 | 7.5e-37 | 0.47992700729927007 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 3.88e-15 | 11 | 481 | 33 | 530 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 238533 | APPLE_Factor_XI_like | 4.48e-10 | 544 | 619 | 4 | 73 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 405052 | PAN_4 | 8.36e-10 | 552 | 600 | 1 | 51 | PAN domain. |
| 366272 | GMC_oxred_N | 7.07e-07 | 56 | 221 | 4 | 165 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 398739 | GMC_oxred_C | 1.21e-05 | 374 | 477 | 24 | 140 | GMC oxidoreductase. This domain found associated with pfam00732. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.87e-160 | 11 | 603 | 55 | 623 | |
| 1.31e-133 | 11 | 622 | 50 | 718 | |
| 1.35e-122 | 11 | 622 | 50 | 722 | |
| 3.29e-116 | 11 | 481 | 50 | 546 | |
| 9.09e-108 | 11 | 466 | 48 | 526 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.44e-26 | 11 | 474 | 33 | 532 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 6.02e-26 | 11 | 474 | 28 | 524 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 6.23e-26 | 11 | 474 | 33 | 529 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 8.66e-26 | 11 | 474 | 255 | 754 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 8.10e-21 | 11 | 474 | 255 | 753 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.36e-25 | 11 | 474 | 260 | 756 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000215 | 0.999746 | CS pos: 22-23. Pr: 0.9546 |