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CAZyme Information: EPrPRT00000014585-p1

You are here: Home > Sequence: EPrPRT00000014585-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium arrhenomanes
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes
CAZyme ID EPrPRT00000014585-p1
CAZy Family AA2
CAZyme Description Carbohydrate-binding protein.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
687 ParrATCC12531_SC00119|CGC1 71830.65 6.4806
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ParrhenomanesATCC12531 13857 1223556 52 13805
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 104 465 3e-59 0.6715328467153284

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 1.39e-17 29 280 7 299
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000 PRK02106 7.73e-14 29 279 5 294
choline dehydrogenase; Validated
238533 APPLE_Factor_XI_like 2.57e-10 626 687 1 73
Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.
366272 GMC_oxred_N 6.25e-08 110 264 58 207
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.46e-07 185 309 218 339
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.71e-159 16 578 15 636
4.06e-159 28 674 22 787
3.49e-141 28 674 22 786
9.09e-129 22 511 16 564
2.63e-120 28 478 20 526

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.58e-35 30 503 3 541
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.68e-35 30 503 8 546
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
5.87e-27 29 341 7 354
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.19e-26 29 341 229 576
Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides]
1.31e-23 29 275 229 510
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.05e-34 30 503 235 773
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
1.55e-09 30 265 2 273
Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1
2.30e-09 27 371 87 459
Ecdysone oxidase OS=Drosophila melanogaster OX=7227 GN=Eo PE=1 SV=2
2.75e-09 30 279 6 295
Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1
6.15e-09 30 265 2 273
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.148060 0.851915 CS pos: 26-27. Pr: 0.3066

TMHMM  Annotations      help

There is no transmembrane helices in EPrPRT00000014585-p1.