logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPRT00000013902-p1

You are here: Home > Sequence: EPrPRT00000013902-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium arrhenomanes
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium arrhenomanes
CAZyme ID EPrPRT00000013902-p1
CAZy Family AA17
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
148 ParrATCC12531_SC00055|CGC1 16876.24 8.2525
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_ParrhenomanesATCC12531 13857 1223556 52 13805
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPRT00000013902-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 2 125 1.6e-42 0.45714285714285713

CDD Domains      help

EPrPRT00000013902-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.85e-38 4 125 69 187
1.10e-37 4 125 69 187
1.10e-37 4 125 69 187
1.10e-37 4 125 69 187
1.56e-37 4 125 69 187

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.28e-06 26 136 60 169
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPRT00000013902-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000052 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in EPrPRT00000013902-p1.