logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPIT00000026519-p1

You are here: Home > Sequence: EPrPIT00000026519-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium irregulare
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare
CAZyme ID EPrPIT00000026519-p1
CAZy Family GT71
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
246 27179.22 8.0653
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GirregulareDAOMBR486 13869 1223557 65 13804
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPIT00000026519-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 217 9.3e-42 0.7061224489795919

CDD Domains      help

EPrPIT00000026519-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.23e-26 6 195 5 190
2.08e-24 13 195 5 183
2.69e-24 25 197 16 184
2.81e-23 25 195 19 186
3.15e-23 24 195 18 185

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.90e-07 89 186 44 151
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPIT00000026519-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000242 0.999730 CS pos: 26-27. Pr: 0.9731

TMHMM  Annotations      help

There is no transmembrane helices in EPrPIT00000026519-p1.