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CAZyme Information: EPrPIT00000024421-p1

You are here: Home > Sequence: EPrPIT00000024421-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium irregulare
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare
CAZyme ID EPrPIT00000024421-p1
CAZy Family GT20|GT20
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
213 22702.49 8.9787
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GirregulareDAOMBR486 13869 1223557 65 13804
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPIT00000024421-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 22 198 4.7e-61 0.6938775510204082

CDD Domains      help

EPrPIT00000024421-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.38e-53 17 167 44 195
3.23e-52 26 169 16 159
3.71e-52 26 169 16 159
4.07e-52 2 167 32 194
6.58e-52 2 167 34 196

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.83e-15 51 169 53 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPIT00000024421-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000253 0.999718 CS pos: 24-25. Pr: 0.9567

TMHMM  Annotations      help

There is no transmembrane helices in EPrPIT00000024421-p1.