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CAZyme Information: EPrPIT00000022135-p1

You are here: Home > Sequence: EPrPIT00000022135-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium irregulare
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare
CAZyme ID EPrPIT00000022135-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
331 35077.76 4.4543
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GirregulareDAOMBR486 13869 1223557 65 13804
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPIT00000022135-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 274 6.4e-62 0.926530612244898

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
236090 PRK07764 1.67e-05 190 316 579 704
DNA polymerase III subunits gamma and tau; Validated
235906 PRK07003 6.93e-05 218 312 443 538
DNA polymerase III subunit gamma/tau.
236090 PRK07764 7.08e-05 228 315 409 494
DNA polymerase III subunits gamma and tau; Validated
223021 PHA03247 8.94e-05 221 316 2656 2748
large tegument protein UL36; Provisional
223021 PHA03247 8.94e-05 220 315 2722 2812
large tegument protein UL36; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.55e-54 4 213 3 214
2.39e-53 4 211 3 212
2.60e-53 10 199 9 197
3.37e-53 4 211 3 212
6.68e-53 4 211 3 212

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.11e-11 25 202 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPIT00000022135-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000430 0.999539 CS pos: 24-25. Pr: 0.9474

TMHMM  Annotations      help

There is no transmembrane helices in EPrPIT00000022135-p1.