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CAZyme Information: EPrPIT00000021733-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Globisporangium irregulare | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare | |||||||||||
| CAZyme ID | EPrPIT00000021733-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | Carbohydrate-binding protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 234 | 547 | 1.3e-55 | 0.5967153284671532 |
| AA3 | 21 | 227 | 1.6e-48 | 0.36313868613138683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 6.07e-29 | 29 | 545 | 8 | 510 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 4.17e-21 | 25 | 372 | 2 | 320 | choline dehydrogenase; Validated |
| 366272 | GMC_oxred_N | 3.86e-17 | 109 | 346 | 15 | 215 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 238533 | APPLE_Factor_XI_like | 7.73e-09 | 659 | 719 | 13 | 72 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 238533 | APPLE_Factor_XI_like | 5.42e-08 | 730 | 774 | 3 | 47 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.36e-221 | 24 | 638 | 24 | 638 | |
| 1.61e-218 | 19 | 777 | 14 | 788 | |
| 7.18e-202 | 29 | 777 | 24 | 787 | |
| 6.72e-161 | 29 | 548 | 22 | 525 | |
| 6.44e-154 | 13 | 548 | 8 | 530 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.00e-47 | 29 | 542 | 3 | 508 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 2.17e-47 | 29 | 542 | 8 | 513 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 3.77e-36 | 29 | 543 | 230 | 738 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
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| 5.85e-33 | 29 | 370 | 8 | 330 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 1.86e-32 | 29 | 370 | 230 | 552 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.28e-45 | 17 | 542 | 223 | 740 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 3.23e-17 | 27 | 547 | 5 | 512 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
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| 1.31e-15 | 23 | 545 | 2 | 512 | Oxygen-dependent choline dehydrogenase 1 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=betA1 PE=3 SV=1 |
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| 3.94e-15 | 29 | 333 | 3 | 295 | Oxygen-dependent choline dehydrogenase OS=Proteus mirabilis (strain HI4320) OX=529507 GN=betA PE=3 SV=1 |
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| 5.27e-15 | 29 | 333 | 3 | 293 | Oxygen-dependent choline dehydrogenase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000288 | 0.999685 | CS pos: 25-26. Pr: 0.9761 |