logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPIT00000020481-p1

You are here: Home > Sequence: EPrPIT00000020481-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium irregulare
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare
CAZyme ID EPrPIT00000020481-p1
CAZy Family GH31
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
277 29686.32 8.1422
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GirregulareDAOMBR486 13869 1223557 65 13804
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPIT00000020481-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 6 246 4e-76 0.9346938775510204

CDD Domains      help

EPrPIT00000020481-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.45e-91 3 277 4 295
7.48e-91 4 277 5 276
8.02e-89 3 196 4 196
1.07e-83 7 207 13 214
3.26e-83 7 207 13 214

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.14e-19 19 186 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPIT00000020481-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000230 0.999745 CS pos: 18-19. Pr: 0.9811

TMHMM  Annotations      help

There is no transmembrane helices in EPrPIT00000020481-p1.