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CAZyme Information: EPrPIT00000017978-p1

You are here: Home > Sequence: EPrPIT00000017978-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Globisporangium irregulare
Lineage Oomycota; NA; ; Pythiaceae; Globisporangium; Globisporangium irregulare
CAZyme ID EPrPIT00000017978-p1
CAZy Family GH16
CAZyme Description Thioredoxin reductase 1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
250 25952.36 8.3608
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_GirregulareDAOMBR486 13869 1223557 65 13804
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPIT00000017978-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 242 7.9e-53 0.8979591836734694

CDD Domains      help

EPrPIT00000017978-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.87e-69 14 204 11 203
6.43e-62 24 202 20 200
3.73e-31 16 201 14 199
5.21e-31 23 201 21 199
7.28e-31 23 201 21 199

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.90e-12 97 197 57 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPIT00000017978-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000257 0.999732 CS pos: 26-27. Pr: 0.9713

TMHMM  Annotations      help

There is no transmembrane helices in EPrPIT00000017978-p1.