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CAZyme Information: EPrPAT00000024866-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium aphanidermatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum | |||||||||||
| CAZyme ID | EPrPAT00000024866-p1 | |||||||||||
| CAZy Family | GT76 | |||||||||||
| CAZyme Description | Pectin lyase. | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 14 | 170 | 2.8e-66 | 0.8021390374331551 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 7.79e-23 | 12 | 169 | 1 | 156 | Amb_all domain. |
| 226384 | PelB | 6.53e-06 | 12 | 94 | 74 | 160 | Pectate lyase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.26e-85 | 1 | 174 | 108 | 290 | |
| 1.55e-85 | 1 | 174 | 108 | 290 | |
| 1.83e-82 | 1 | 172 | 144 | 316 | |
| 2.59e-82 | 1 | 172 | 144 | 316 | |
| 2.59e-82 | 1 | 172 | 144 | 316 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.75e-39 | 7 | 165 | 82 | 239 | Pectin Lyase B [Aspergillus niger] |
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| 1.56e-37 | 7 | 165 | 82 | 239 | Pectin Lyase A [Aspergillus niger] |
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| 1.66e-36 | 7 | 165 | 82 | 239 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.35e-57 | 5 | 173 | 104 | 266 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 4.77e-53 | 7 | 173 | 108 | 268 | Probable pectin lyase F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelF PE=3 SV=1 |
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| 4.77e-53 | 7 | 173 | 108 | 268 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
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| 9.66e-53 | 7 | 173 | 107 | 267 | Probable pectin lyase F OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelF PE=3 SV=1 |
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| 9.66e-53 | 7 | 173 | 107 | 267 | Probable pectin lyase F OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelF PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000019 | 0.000004 |