logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EPrPAT00000023455-p1

You are here: Home > Sequence: EPrPAT00000023455-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000023455-p1
CAZy Family GT48
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
392 41996.36 5.5844
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000023455-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 27 265 4.2e-68 0.8653061224489796

CDD Domains      help

EPrPAT00000023455-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.97e-57 29 219 17 197
2.46e-56 29 219 17 197
9.73e-56 29 218 16 195
1.47e-54 29 208 21 195
4.08e-54 27 208 19 195

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.53e-08 92 210 43 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPAT00000023455-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.163710 0.836258 CS pos: 24-25. Pr: 0.5602

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000023455-p1.