dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: EPrPAT00000023441-p1

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Basic Information help

Species

Pythium aphanidermatum

Lineage

Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum

CAZyme ID

EPrPAT00000023441-p1

CAZy Family

GT41

CAZyme Description

AT30101p.

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
702		78368.77	9.0960

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444	12363	1223555	58	12305

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	2.4.1.109:4

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT105	91	223	6e-34	0.9312977099236641

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
400627	DUF1736	2.14e-17	276	332	18	74	Domain of unknown function (DUF1736). This domain of unknown function is found in various hypothetical metazoan proteins.
276809	TPR	1.69e-07	597	688	3	88	Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.
276809	TPR	2.04e-07	597	657	37	97	Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.
405276	TPR_19	2.16e-04	609	675	5	68	Tetratricopeptide repeat.
223533	TPR	3.24e-04	488	689	112	291	Tetratricopeptide (TPR) repeat [General function prediction only].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
8.20e-67	35	481	41	491
9.72e-66	35	481	41	491
9.72e-66	35	481	41	491
9.72e-66	35	481	41	491
9.72e-66	35	481	41	491

PDB Hits help

EPrPAT00000023441-p1 has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
1.73e-66	35	481	41	491	Protein O-mannosyl-transferase TMTC4 OS=Mus musculus OX=10090 GN=Tmtc4 PE=2 SV=1
4.30e-65	35	481	42	491	Protein O-mannosyl-transferase TMTC4 OS=Homo sapiens OX=9606 GN=TMTC4 PE=1 SV=2
2.12e-64	18	648	9	616	Protein O-mannosyl-transferase TMTC3 OS=Homo sapiens OX=9606 GN=TMTC3 PE=1 SV=2
1.06e-63	15	644	13	617	Protein O-mannosyl-transferase TMTC3 OS=Mus musculus OX=10090 GN=Tmtc3 PE=1 SV=2
1.71e-59	4	547	18	584	Protein O-mannosyl-transferase Tmtc3 OS=Drosophila melanogaster OX=7227 GN=Tmtc3 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.299144	0.700843	CS pos: 27-28. Pr: 0.6040

TMHMM Annotations download full data without filtering help

Start	End
192	214
234	256
347	369
379	401
422	444