dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: EPrPAT00000022752-p1

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Basic Information help

Species

Pythium aphanidermatum

Lineage

Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum

CAZyme ID

EPrPAT00000022752-p1

CAZy Family

GT4

CAZyme Description

unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
759	PaphDAOMBR444_SC0627\|CGC1	85390.14	8.0435

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444	12363	1223555	58	12305

Gene Location

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in EPrPAT00000022752-p1.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT71	391	621	2.6e-50	0.9924242424242424

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
402574	Mannosyl_trans3	1.23e-36	391	621	2	273	Mannosyltransferase putative. This family is conserved in fungi. Several members are annotated as being alpha-1,3-mannosyltransferase but this could not be confirmed.
223021	PHA03247	9.70e-05	3	216	2659	2880	large tegument protein UL36; Provisional
237865	PRK14951	0.001	83	287	372	546	DNA polymerase III subunits gamma and tau; Provisional
404520	Glyco_tranf_2_3	0.001	399	600	15	208	Glycosyltransferase like family 2. Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.
133018	GT8_Glycogenin	0.002	464	536	80	150	Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
2.84e-104	271	747	88	572
5.29e-103	284	758	136	611
1.11e-95	289	737	96	534
1.36e-92	265	639	44	422
1.01e-90	275	753	51	497

PDB Hits help

EPrPAT00000022752-p1 has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
3.25e-12	371	641	145	456	Alpha-1,2-mannosyltransferase MNN22 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN22 PE=2 SV=1
3.68e-10	390	652	173	472	Alpha-1,2-mannosyltransferase MNN23 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN23 PE=3 SV=2
5.16e-10	381	629	235	534	Alpha-1,2-mannosyltransferase MNN21 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN21 PE=3 SV=1
1.91e-09	392	621	172	440	Alpha-1,2-mannosyltransferase MNN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNN2 PE=1 SV=1
1.32e-08	392	511	188	312	Alpha-1,2-mannosyltransferase MNN2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MNN2 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999207	0.000784

TMHMM Annotations help

There is no transmembrane helices in EPrPAT00000022752-p1.