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CAZyme Information: EPrPAT00000022718-p1

You are here: Home > Sequence: EPrPAT00000022718-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000022718-p1
CAZy Family GT4
CAZyme Description Carbohydrate-binding protein.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
528 PaphDAOMBR444_SC0622|CGC1 57887.82 6.2862
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.1.99.18:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 3 477 9.9e-83 0.8832116788321168

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225186 BetA 2.50e-23 17 477 49 533
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
366272 GMC_oxred_N 5.10e-21 43 227 24 204
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
235000 PRK02106 1.08e-10 43 234 85 281
choline dehydrogenase; Validated
215420 PLN02785 6.17e-09 44 234 129 309
Protein HOTHEAD
398739 GMC_oxred_C 0.001 421 455 91 124
GMC oxidoreductase. This domain found associated with pfam00732.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.31e-124 1 480 66 550
1.50e-117 1 475 71 546
2.55e-111 2 480 67 552
4.36e-108 1 478 66 548
8.16e-103 1 459 64 526

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.11e-33 1 481 44 538
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
2.22e-33 1 481 49 543
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
2.10e-24 13 477 283 763
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
2.14e-10 39 455 156 613
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
2.61e-10 39 455 80 537
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.70e-32 1 481 276 770
Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1
1.49e-11 17 474 49 530
Oxygen-dependent choline dehydrogenase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=betA PE=3 SV=1
1.40e-10 17 474 49 530
Oxygen-dependent choline dehydrogenase OS=Staphylococcus xylosus OX=1288 GN=betA PE=3 SV=1
4.23e-10 34 232 69 274
Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1
1.75e-09 12 474 45 531
Oxygen-dependent choline dehydrogenase OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000059 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000022718-p1.