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CAZyme Information: EPrPAT00000022273-p1

You are here: Home > Sequence: EPrPAT00000022273-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000022273-p1
CAZy Family GT24
CAZyme Description Thioredoxin reductase 1.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
268 29495.59 9.6389
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000022273-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 250 2.3e-52 0.9469387755102041

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
177871 PLN02226 2.28e-04 202 267 176 236
2-oxoglutarate dehydrogenase E2 component
411490 pneumo_PspA 0.001 201 262 377 440
pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
234818 PRK00708 0.007 201 261 117 176
twin-arginine translocase subunit TatB.
240289 PTZ00144 0.007 201 260 122 181
dihydrolipoamide succinyltransferase; Provisional
411474 fibronec_FbpA 0.007 199 262 166 239
LPXTG-anchored fibronectin-binding protein FbpA. FbpA, a fibronectin-binding protein described in Streptococcus pyogenes, has a YSIRK-type (crosswall-targeting) signal peptide and a C-terminal LPXTG motif for covalent attachment to the cell wall. It is unrelated to the PavA-like protein from Streptococcus gordonii (see BlastRule NBR009716) that was given the identical name, so the phase LPXTG-anchored is added to the protein name for clarity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.06e-57 15 212 19 223
2.58e-57 15 187 2 169
2.84e-57 15 187 2 169
4.25e-57 15 212 19 223
5.92e-57 15 212 78 282

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.96e-21 77 187 53 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPAT00000022273-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000302 0.999662 CS pos: 25-26. Pr: 0.9610

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000022273-p1.