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CAZyme Information: EPrPAT00000022253-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pythium aphanidermatum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum | |||||||||||
| CAZyme ID | EPrPAT00000022253-p1 | |||||||||||
| CAZy Family | GT22 | |||||||||||
| CAZyme Description | Carbohydrate-binding protein. | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 1.1.99.18:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 21 | 552 | 9e-108 | 0.9744525547445255 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 4.73e-35 | 28 | 554 | 8 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 1.40e-18 | 23 | 310 | 1 | 292 | choline dehydrogenase; Validated |
| 238533 | APPLE_Factor_XI_like | 1.81e-13 | 798 | 867 | 3 | 72 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 238533 | APPLE_Factor_XI_like | 4.67e-13 | 721 | 793 | 1 | 72 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
| 238533 | APPLE_Factor_XI_like | 1.61e-11 | 570 | 629 | 11 | 69 | Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 3.51e-254 | 13 | 867 | 9 | 883 | |
| 2.47e-247 | 14 | 633 | 15 | 638 | |
| 1.57e-238 | 28 | 851 | 24 | 867 | |
| 8.55e-158 | 19 | 534 | 13 | 526 | |
| 2.85e-154 | 12 | 554 | 12 | 551 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.05e-53 | 28 | 557 | 3 | 539 | Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 9.95e-53 | 28 | 557 | 8 | 544 | Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium] |
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| 6.87e-37 | 28 | 562 | 8 | 552 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides],4QI5_A Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
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| 3.20e-36 | 28 | 582 | 230 | 792 | Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A] |
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| 3.21e-36 | 28 | 562 | 230 | 774 | Chain A, Cellobiose dehydrogenase [Thermothelomyces myriococcoides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.32e-50 | 28 | 557 | 235 | 771 | Cellobiose dehydrogenase OS=Phanerodontia chrysosporium OX=2822231 GN=CDH-1 PE=1 SV=1 |
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| 6.42e-16 | 26 | 554 | 5 | 535 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
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| 8.33e-15 | 28 | 310 | 3 | 290 | Oxygen-dependent choline dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=betA PE=3 SV=1 |
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| 1.90e-14 | 28 | 302 | 3 | 282 | Oxygen-dependent choline dehydrogenase OS=Serratia proteamaculans (strain 568) OX=399741 GN=betA PE=3 SV=1 |
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| 5.87e-14 | 23 | 302 | 2 | 284 | Oxygen-dependent choline dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.005958 | 0.994005 | CS pos: 24-25. Pr: 0.9525 |