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CAZyme Information: EPrPAT00000020161-p1

You are here: Home > Sequence: EPrPAT00000020161-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000020161-p1
CAZy Family GH6
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
221 PaphDAOMBR444_SC0328|CGC1 23358.43 9.1999
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000020161-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 9 210 2e-39 0.8938775510204081

CDD Domains      help

EPrPAT00000020161-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.53e-50 1 176 1 195
2.53e-50 1 176 1 195
2.53e-50 1 176 1 195
4.05e-50 1 176 19 213
5.72e-50 1 176 19 213

PDB Hits      help

EPrPAT00000020161-p1 has no PDB hit.

Swiss-Prot Hits      help

EPrPAT00000020161-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000285 0.999670 CS pos: 21-22. Pr: 0.9778

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000020161-p1.