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CAZyme Information: EPrPAT00000018982-p1

You are here: Home > Sequence: EPrPAT00000018982-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000018982-p1
CAZy Family GH43
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
184 PaphDAOMBR444_SC0234|CGC1 19663.54 6.9304
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000018982-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 13 175 3.3e-30 0.673469387755102

CDD Domains      help

EPrPAT00000018982-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.22e-20 17 174 16 185
3.97e-19 19 174 18 185
3.97e-19 19 174 18 185
2.91e-18 14 176 11 186
5.80e-18 15 176 15 186

PDB Hits      help

EPrPAT00000018982-p1 has no PDB hit.

Swiss-Prot Hits      help

EPrPAT00000018982-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000234 0.999736 CS pos: 23-24. Pr: 0.9778

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000018982-p1.