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CAZyme Information: EPrPAT00000018227-p1

You are here: Home > Sequence: EPrPAT00000018227-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000018227-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
222 25313.00 8.0885
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000018227-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 15 183 5.9e-25 0.6408163265306123

CDD Domains      help

EPrPAT00000018227-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.05e-31 19 185 24 188
4.07e-31 19 185 24 188
5.73e-31 19 185 24 188
5.73e-31 19 185 24 188
5.73e-31 19 185 24 188

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.05e-08 128 193 98 168
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPAT00000018227-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000289 0.999666 CS pos: 20-21. Pr: 0.9319

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000018227-p1.