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CAZyme Information: EPrPAT00000018221-p1

You are here: Home > Sequence: EPrPAT00000018221-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000018221-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
226 PaphDAOMBR444_SC0187|CGC1 25289.10 6.6250
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000018221-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 11 206 3.6e-70 0.7591836734693878

CDD Domains      help

EPrPAT00000018221-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.92e-64 1 197 1 195
1.92e-64 1 197 1 195
1.92e-64 1 197 1 195
1.55e-63 1 197 1 195
2.74e-63 1 197 1 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.72e-24 23 192 1 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

EPrPAT00000018221-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000232 0.999777 CS pos: 22-23. Pr: 0.9768

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000018221-p1.