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CAZyme Information: EPrPAT00000017936-p1

You are here: Home > Sequence: EPrPAT00000017936-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000017936-p1
CAZy Family GH2
CAZyme Description Glycoside hydrolase.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 64054.49 4.9920
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000017936-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 50 295 5e-59 0.9081632653061225

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 1.69e-42 54 297 11 290
Glycosyl hydrolases family 6.
227616 CelA1 1.59e-18 81 341 178 460
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].
223021 PHA03247 1.59e-04 320 447 2748 2877
large tegument protein UL36; Provisional
223021 PHA03247 0.002 327 447 2706 2833
large tegument protein UL36; Provisional
177464 PHA02682 0.004 335 447 70 162
ORF080 virion core protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.29e-88 24 304 19 299
6.26e-79 5 328 4 338
3.10e-78 27 317 21 310
3.55e-78 50 317 43 290
7.95e-75 24 313 14 287

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.84e-28 86 317 65 311
GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
8.08e-27 91 316 73 284
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv]
8.08e-27 91 316 73 284
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv]
1.22e-26 91 316 94 305
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom [Mycobacterium tuberculosis H37Rv]
1.49e-26 91 316 73 284
Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with glucose-isofagomine at 1.9 angstrom [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-22 60 296 113 343
Endoglucanase 1 OS=Streptomyces sp. (strain KSM-9) OX=74575 GN=casA PE=1 SV=3
3.04e-22 91 292 104 301
Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
3.56e-22 91 292 101 297
Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2
2.95e-21 91 315 238 438
Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1
2.56e-20 91 313 106 349
Probable exoglucanase GH6D OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=GH6D PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000263 0.999715 CS pos: 22-23. Pr: 0.9777

TMHMM  Annotations      download full data without filtering help

Start End
560 582