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CAZyme Information: EPrPAT00000017736-p1

You are here: Home > Sequence: EPrPAT00000017736-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000017736-p1
CAZy Family GH17
CAZyme Description Membrane-bound dehydrogenase domain protein.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 PaphDAOMBR444_SC0161|CGC1 76843.06 4.6140
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.80:2 3.2.1.26:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM38 195 371 1.9e-23 0.9612403100775194

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
197594 Calx_beta 4.34e-13 568 677 3 89
Domains in Na-Ca exchangers and integrin-beta4. Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
397326 Calx-beta 2.84e-11 568 677 3 90
Calx-beta domain.
316802 FG-GAP_2 1.90e-07 151 183 1 33
FG-GAP repeat.
273296 caca 2.65e-06 585 700 416 525
sodium/calcium exchanger 1. The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.10e-31 193 444 68 270
4.79e-17 195 390 32 186
6.91e-17 195 384 32 180
8.52e-17 195 387 35 178
3.72e-16 195 384 36 184

PDB Hits      help

EPrPAT00000017736-p1 has no PDB hit.

Swiss-Prot Hits      help

EPrPAT00000017736-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999876 0.000157

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000017736-p1.