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CAZyme Information: EPrPAT00000016994-p1

You are here: Home > Sequence: EPrPAT00000016994-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pythium aphanidermatum
Lineage Oomycota; NA; ; Pythiaceae; Pythium; Pythium aphanidermatum
CAZyme ID EPrPAT00000016994-p1
CAZy Family GH11
CAZyme Description Thioredoxin reductase 1.
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
264 PaphDAOMBR444_SC0123|CGC1 27941.34 8.1282
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PaphanidermatumDAOMBR444 12363 1223555 58 12305
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EPrPAT00000016994-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 10 250 2.2e-63 0.9591836734693877

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
237030 kgd 4.24e-05 195 254 40 99
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
237030 kgd 8.07e-04 191 254 40 101
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
234818 PRK00708 0.001 200 261 146 206
twin-arginine translocase subunit TatB.
237030 kgd 0.001 197 254 37 93
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.
273167 rad23 0.001 191 251 78 142
UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.16e-69 11 195 11 195
1.30e-68 11 195 11 195
1.30e-68 11 195 11 195
1.56e-68 11 195 29 213
1.69e-68 11 195 11 195

PDB Hits      help

EPrPAT00000016994-p1 has no PDB hit.

Swiss-Prot Hits      help

EPrPAT00000016994-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000248 0.999728 CS pos: 22-23. Pr: 0.9787

TMHMM  Annotations      help

There is no transmembrane helices in EPrPAT00000016994-p1.