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CAZyme Information: EPE09803.1

You are here: Home > Sequence: EPE09803.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ophiostoma piceae
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Ophiostoma; Ophiostoma piceae
CAZyme ID EPE09803.1
CAZy Family GT22
CAZyme Description Extracellular exo-polygalacturonase [Source:UniProtKB/TrEMBL;Acc:S3CT13]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
456 49001.77 5.4519
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_OpiceaeUAMH11346 8884 1262450 0 8884
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 89 438 5e-70 0.9538461538461539

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.30e-38 113 438 21 314
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 5.73e-37 54 436 40 406
Probable polygalacturonase
215120 PLN02188 3.06e-31 66 438 39 389
polygalacturonase/glycoside hydrolase family protein
178580 PLN03003 2.84e-28 73 438 33 374
Probable polygalacturonase At3g15720
177865 PLN02218 9.97e-28 61 438 65 417
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.33e-213 5 456 7 456
1.32e-212 5 456 7 456
1.88e-212 5 456 7 456
2.91e-204 5 456 7 455
7.10e-189 38 448 33 459

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.55e-76 66 449 18 383
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.88e-19 153 436 66 340
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
8.43e-15 64 451 18 374
Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]
6.85e-12 157 370 110 317
Chain A, POLYGALACTURONASE [Pectobacterium carotovorum]
3.11e-10 151 367 61 262
Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.45e-181 50 448 34 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2
6.45e-181 50 448 34 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2
6.50e-179 35 449 19 432
Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1
5.68e-178 60 449 49 437
Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1
5.69e-177 1 448 1 431
Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000218 0.999758 CS pos: 16-17. Pr: 0.9838

TMHMM  Annotations      help

There is no transmembrane helices in EPE09803.1.