You are browsing environment: FUNGIDB
CAZyme Information: EPE07018.1
You are here: Home > Sequence: EPE07018.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ophiostoma piceae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Ophiostomataceae; Ophiostoma; Ophiostoma piceae | |||||||||||
| CAZyme ID | EPE07018.1 | |||||||||||
| CAZy Family | GH47 | |||||||||||
| CAZyme Description | Glycoside hydrolase family 28 protein [Source:UniProtKB/TrEMBL;Acc:S3CKK9] | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 63 | 374 | 1.6e-48 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215540 | PLN03010 | 2.96e-19 | 40 | 375 | 48 | 391 | polygalacturonase |
| 395231 | Glyco_hydro_28 | 7.80e-16 | 147 | 373 | 85 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 1.10e-15 | 130 | 376 | 151 | 412 | Probable polygalacturonase |
| 177865 | PLN02218 | 2.15e-11 | 126 | 373 | 162 | 418 | polygalacturonase ADPG |
| 178580 | PLN03003 | 6.72e-11 | 40 | 375 | 25 | 377 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.15e-234 | 15 | 440 | 19 | 443 | |
| 5.15e-234 | 15 | 440 | 19 | 443 | |
| 8.06e-231 | 15 | 440 | 19 | 443 | |
| 2.51e-225 | 15 | 441 | 19 | 444 | |
| 3.72e-213 | 3 | 442 | 5 | 441 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.94e-192 | 19 | 440 | 1 | 420 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
|
| 2.37e-08 | 197 | 333 | 167 | 309 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.94e-192 | 4 | 440 | 3 | 438 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
|
| 6.50e-183 | 11 | 441 | 13 | 443 | Probable rhamnogalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rhgB PE=3 SV=1 |
|
| 2.06e-179 | 2 | 440 | 1 | 439 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
|
| 6.79e-179 | 11 | 442 | 13 | 445 | Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rhgB PE=3 SV=1 |
|
| 1.36e-178 | 11 | 442 | 13 | 445 | Probable rhamnogalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rhgB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000323 | 0.999675 | CS pos: 18-19. Pr: 0.9648 |