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CAZyme Information: EPE06971.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ophiostoma piceae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Ophiostomataceae; Ophiostoma; Ophiostoma piceae | |||||||||||
| CAZyme ID | EPE06971.1 | |||||||||||
| CAZy Family | GH47 | |||||||||||
| CAZyme Description | GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:S3C544] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 13 | 543 | 1.9e-136 | 0.9964788732394366 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 225186 | BetA | 3.72e-99 | 13 | 545 | 7 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 235000 | PRK02106 | 1.82e-93 | 14 | 541 | 6 | 532 | choline dehydrogenase; Validated |
| 398739 | GMC_oxred_C | 2.35e-33 | 398 | 534 | 1 | 141 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 3.08e-28 | 1 | 543 | 43 | 579 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 5.23e-23 | 90 | 308 | 23 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 546 | 1 | 546 | |
| 2.38e-315 | 1 | 551 | 1 | 552 | |
| 3.32e-301 | 1 | 544 | 1 | 533 | |
| 3.16e-299 | 2 | 551 | 3 | 542 | |
| 3.81e-298 | 14 | 543 | 15 | 532 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.64e-117 | 13 | 540 | 13 | 526 | Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
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| 3.73e-117 | 13 | 540 | 13 | 526 | Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
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| 1.05e-116 | 13 | 540 | 13 | 526 | Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
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| 9.42e-58 | 7 | 540 | 1 | 560 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 4.84e-57 | 7 | 540 | 1 | 560 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.36e-116 | 13 | 540 | 13 | 526 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
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| 4.01e-72 | 14 | 550 | 2 | 544 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida OX=303 GN=alkJ PE=3 SV=1 |
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| 2.67e-69 | 14 | 543 | 2 | 530 | Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans OX=301 GN=alkJ PE=1 SV=1 |
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| 1.98e-68 | 10 | 549 | 3 | 541 | 4-pyridoxate dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=padh1 PE=1 SV=1 |
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| 2.73e-68 | 15 | 540 | 6 | 526 | Uncharacterized GMC-type oxidoreductase MT1316 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1316 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000013 | 0.000022 |