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CAZyme Information: EPE02184.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ophiostoma piceae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Ophiostomataceae; Ophiostoma; Ophiostoma piceae | |||||||||||
| CAZyme ID | EPE02184.1 | |||||||||||
| CAZy Family | AA1 | |||||||||||
| CAZyme Description | Glycoside hydrolase family 28 protein [Source:UniProtKB/TrEMBL;Acc:S3BLS4] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 54 | 374 | 3e-70 | 0.9753846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 8.77e-126 | 58 | 379 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 178580 | PLN03003 | 7.83e-29 | 109 | 346 | 114 | 341 | Probable polygalacturonase At3g15720 |
| 227721 | Pgu1 | 1.01e-25 | 122 | 304 | 215 | 408 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 177865 | PLN02218 | 6.16e-23 | 95 | 375 | 143 | 422 | polygalacturonase ADPG |
| 215540 | PLN03010 | 7.89e-20 | 96 | 373 | 122 | 389 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.32e-225 | 1 | 379 | 1 | 379 | |
| 7.32e-225 | 1 | 379 | 1 | 379 | |
| 4.23e-224 | 1 | 379 | 1 | 379 | |
| 4.26e-201 | 11 | 379 | 13 | 379 | |
| 4.67e-192 | 11 | 379 | 14 | 382 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.27e-159 | 37 | 379 | 1 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
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| 7.20e-147 | 31 | 379 | 2 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.14e-146 | 31 | 379 | 2 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.19e-143 | 39 | 379 | 2 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.32e-143 | 39 | 376 | 2 | 334 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.04e-182 | 8 | 379 | 10 | 378 | Probable endopolygalacturonase AFUB_016610 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=AFUB_016610 PE=3 SV=1 |
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| 1.04e-182 | 8 | 379 | 10 | 378 | Probable endopolygalacturonase AFUA_1G17220 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G17220 PE=3 SV=1 |
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| 1.39e-180 | 28 | 379 | 27 | 378 | Probable endopolygalacturonase NFIA_008150 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=NFIA_008150 PE=3 SV=1 |
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| 2.12e-180 | 8 | 379 | 10 | 378 | Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=AN8327 PE=1 SV=1 |
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| 2.95e-163 | 5 | 379 | 5 | 378 | Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000313 | 0.999674 | CS pos: 36-37. Pr: 0.2537 |