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CAZyme Information: ELR02563.1

You are here: Home > Sequence: ELR02563.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudogymnoascus destructans
Lineage Ascomycota; Leotiomycetes; ; Pseudeurotiaceae; Pseudogymnoascus; Pseudogymnoascus destructans
CAZyme ID ELR02563.1
CAZy Family AA3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
282 30556.87 4.2139
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Pdestructans20631-21 9225 658429 150 9075
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ELR02563.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 71 279 1.8e-27 0.5507692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
178580 PLN03003 0.001 144 239 168 256
Probable polygalacturonase At3g15720
227721 Pgu1 0.001 125 224 249 344
Polygalacturonase [Carbohydrate transport and metabolism].
395231 Glyco_hydro_28 0.001 116 239 87 204
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 0.003 161 241 226 302
Probable polygalacturonase
404168 Beta_helix 0.003 108 225 40 149
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.20e-116 1 282 98 404
1.46e-112 1 282 99 405
2.68e-112 1 282 96 402
6.48e-111 1 282 97 402
3.90e-110 1 282 96 403

PDB Hits      help

ELR02563.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.59e-07 109 276 246 388
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000068 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in ELR02563.1.