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CAZyme Information: EKG21670.1

You are here: Home > Sequence: EKG21670.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Macrophomina phaseolina
Lineage Ascomycota; Dothideomycetes; ; Botryosphaeriaceae; Macrophomina; Macrophomina phaseolina
CAZyme ID EKG21670.1
CAZy Family GT48
CAZyme Description Pectate lyase [Source:UniProtKB/TrEMBL;Acc:K2SYJ8]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
228 23774.74 3.9127
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_MphaseolinaMS6 14712 1126212 906 13806
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL3 16 138 5.3e-47 0.654639175257732

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397360 Pectate_lyase 2.72e-56 13 136 10 134
Pectate lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.05e-36 32 136 62 166
9.53e-36 30 133 45 156
9.53e-36 30 133 45 156
9.53e-36 30 133 45 156
4.81e-35 4 136 38 172

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.12e-18 26 142 17 136
Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15]
2.58e-13 30 133 19 127
The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725]
2.63e-13 30 133 20 128
The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii],3T9G_B The crystal structure of family 3 pectate lyase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii]
3.00e-13 30 133 28 136
C. bescii Family 3 pectate lyase double mutant K108A/Q111N in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725],4YZQ_B C. bescii Family 3 pectate lyase double mutant K108A/Q111N in complex with trigalacturonic acid [Caldicellulosiruptor bescii DSM 6725]
1.09e-12 30 140 28 146
C. bescii Family 3 pectate lyase double mutant K108A/R133A in complex with ALPHA-D-GALACTOPYRANURONIC ACID [Caldicellulosiruptor bescii DSM 6725],4Z06_B C. bescii Family 3 pectate lyase double mutant K108A/R133A in complex with ALPHA-D-GALACTOPYRANURONIC ACID [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.90e-34 3 136 35 169
Probable pectate lyase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyE PE=3 SV=1
4.90e-34 3 136 35 169
Probable pectate lyase E OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyE PE=3 SV=1
1.15e-33 26 136 63 173
Probable pectate lyase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyD PE=3 SV=1
2.51e-33 22 136 51 166
Pectate lyase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyE PE=1 SV=1
3.54e-33 3 136 32 166
Probable pectate lyase E OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=plyE PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.998768 0.001249

TMHMM  Annotations      help

There is no transmembrane helices in EKG21670.1.