CAZyme Information: EKG21504.1

Basic Information

• Species: Macrophomina phaseolina
• Lineage: Ascomycota; Dothideomycetes; ; Botryosphaeriaceae; Macrophomina; Macrophomina phaseolina
• CAZyme ID: EKG21504.1
• CAZy Family: GT39
• CAZyme Description: Pectate lyase catalytic

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
248		26081.62	7.4801

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_MphaseolinaMS6	14712	1126212	906	13806

• Gene Location: location=AHHD01000048:18533-19279(-)

Full Sequence      

MQYKYTVLAATMAAVAFAQQNLIGIPTGTKAKPFTQPETITFFDGKMMEYGRGKPCGTDD
DKGDLEAVFIIKPGGTLQNAIIGADSLEGVHCEGACTIKNVWFKDVCEDAITLKGNGPYL
ITGGGAQHAKDKVVQHNGKGTVTISDYKIGAVGKLYRSCGNCSNNGGPRNVVLDRISSFG
PGTTSDLVGINSNYNDVATISGVCGPVKNMCQEFTGIEKDGNKESPHREPPIGACKGPQG
QLKTAPAC

Enzyme Prediction     

No EC number prediction in EKG21504.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL3	37	216	6.4e-69	0.9484536082474226

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397360	Pectate_lyase	2.08e-87	24	220	3	199	Pectate lyase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UJO24501.1|PL3_2	1.18e-76	6	248	3	241
CAE7219057.1|PL3_2	2.15e-74	15	248	12	245
UQC87820.1|PL3_2	1.93e-72	1	237	1	232
CBX97807.1|PL3_2	4.84e-72	7	248	6	246
CEI67773.1|PL3_2	8.29e-72	5	223	3	222

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3B90_A	3.39e-33	43	219	9	199	Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B90_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
3B4N_A	3.14e-32	31	219	115	317	Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B4N_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_A Chain A, Endo-pectate lyase [Dickeya chrysanthemi],3B8Y_B Chain B, Endo-pectate lyase [Dickeya chrysanthemi]
4U49_A	5.06e-26	53	229	143	330	Chain A, Pectate lyase [Pectobacterium carotovorum],4U49_B Chain B, Pectate lyase [Pectobacterium carotovorum],4U4B_A Chain A, Pectate lyase [Pectobacterium carotovorum]
1EE6_A	8.31e-25	43	200	17	180	Crystal Structure Of Pectate Lyase From Bacillus Sp. Strain Ksm-P15. [Bacillus sp. KSM-P15]
4EW9_A	2.76e-18	43	161	22	139	The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725],4EW9_B The liganded structure of C. bescii family 3 pectate lyase [Caldicellulosiruptor bescii DSM 6725]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A1DBJ7|PLYE_NEOFI	1.29e-63	25	236	36	246	Probable pectate lyase E OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyE PE=3 SV=1
sp|Q5B7Z3|PLYE_EMENI	3.67e-63	25	236	36	246	Pectate lyase E OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyE PE=1 SV=1
sp|Q5ATC7|PLYH_EMENI	4.40e-63	43	226	60	240	Pectate lyase H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyH PE=1 SV=1
sp|Q5BA88|PLYD_EMENI	3.99e-62	25	236	42	256	Probable pectate lyase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyD PE=3 SV=1
sp|B0Y9M8|PLYE_ASPFC	1.18e-61	25	236	36	246	Probable pectate lyase E OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyE PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000303	0.999642	CS pos: 18-19. Pr: 0.9781

TMHMM  Annotations     

There is no transmembrane helices in EKG21504.1.