logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EKG19809.1

You are here: Home > Sequence: EKG19809.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Macrophomina phaseolina
Lineage Ascomycota; Dothideomycetes; ; Botryosphaeriaceae; Macrophomina; Macrophomina phaseolina
CAZyme ID EKG19809.1
CAZy Family GH92
CAZyme Description Glycoside hydrolase family 10
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
323 34235.51 5.6605
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_MphaseolinaMS6 14712 1126212 906 13806
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:45

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 29 322 1.9e-106 0.9933993399339934

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395262 Glyco_hydro_10 2.12e-144 29 321 1 310
Glycosyl hydrolase family 10.
214750 Glyco_10 4.72e-119 72 319 1 263
Glycosyl hydrolase family 10.
226217 XynA 3.60e-74 7 320 3 338
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.36e-165 23 323 22 323
3.36e-165 23 323 22 323
3.36e-165 23 323 22 323
3.36e-165 23 323 22 323
1.36e-164 23 323 22 323

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.95e-149 25 323 2 302
Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
1.62e-147 25 323 2 302
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE) [Penicillium simplicissimum],1B31_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, NATIVE WITH PEG200 AS CRYOPROTECTANT [Penicillium simplicissimum],1B3V_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOSE [Penicillium simplicissimum],1B3W_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE [Penicillium simplicissimum],1B3X_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTRIOSE [Penicillium simplicissimum],1B3Y_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOTETRAOSE [Penicillium simplicissimum],1B3Z_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOPENTAOSE [Penicillium simplicissimum],1BG4_A XYLANASE FROM PENICILLIUM SIMPLICISSIMUM [Penicillium simplicissimum]
4.81e-147 24 323 1 301
Structural studies on the mobility in the active site of the Thermoascus aurantiacus xylanase I [Thermoascus aurantiacus]
2.77e-146 25 323 2 301
Thermostable xylanase I from Thermoascus aurantiacus- Crystal form II [Thermoascus aurantiacus],1GOM_A Thermostable xylanase I from Thermoascus aurantiacus- Crystal form I [Thermoascus aurantiacus],1GOO_A Thermostable xylanase I from Thermoascus aurantiacus - Cryocooled glycerol complex [Thermoascus aurantiacus],1GOQ_A Thermostable xylanase I from Thermoascus aurantiacus - Room temperature xylobiose complex [Thermoascus aurantiacus],1GOR_A THERMOSTABLE XYLANASE I FROM THERMOASCUS AURANTIACUS - XYLOBIOSE COMPLEX AT 100 K [Thermoascus aurantiacus]
9.18e-145 28 323 4 302
Crystal Structure of xylanase (GH10) in complex with inhibitor (XIP) [Aspergillus nidulans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.96e-166 23 323 22 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
2.37e-152 16 323 17 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
3.91e-151 6 323 8 327
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnC PE=1 SV=1
5.35e-151 23 323 25 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=xlnC PE=2 SV=2
1.12e-150 4 323 6 327
Endo-1,4-beta-xylanase A OS=Penicillium canescens OX=5083 GN=xylA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000214 0.999767 CS pos: 23-24. Pr: 0.9361

TMHMM  Annotations      help

There is no transmembrane helices in EKG19809.1.