CAZyme Information: EKG18993.1

Basic Information

• Species: Macrophomina phaseolina
• Lineage: Ascomycota; Dothideomycetes; ; Botryosphaeriaceae; Macrophomina; Macrophomina phaseolina
• CAZyme ID: EKG18993.1
• CAZy Family: GH71
• CAZyme Description: Pectin lyase fold/virulence factor

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
837	AHHD01000167|CGC1	88135.20	5.7604

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_MphaseolinaMS6	14712	1126212	906	13806

• Gene Location: location=AHHD01000167:90708-93322(-)

Full Sequence      

MRSFPLLSLALALGLSAAAPTNGTKSTGADAAEASAHCFDNVYPSLDYSPHPTGIPYTKF
NETKEPWASVNTPASNVTKPKVLLAQAACSPLTADNPSSYWLGGVTHNGKSSFLNADQGD
YSTFRNVVTDFGADNTGKSSATTAIQNAINRGPANGNGRNQANNGYGTTGQPAIIYLPSG
TYLLDKPLQLYIGTVIVGDAVNPPVLKAASGFSGDHIIYGKDPRQYLNGGTINFYIGLKN
VVIDSTAISPSTGITLLDWTVSQATQITNVVFQMPNYSTGHVGMRTGEWSGDQGYNSNII
INDLTFNGGKVGIWASGQQWVFKGIKFNGCTTGMQLSANDVVVTSSTFQNLGTGIEASGI
GGSLVVIDSTTSSIGSFISSGNTYQPNGIVLENIKHSGTTVYMNGQTLLTGNVDDTWYRG
NAYPTPGSGAHAWIPNGQKGTTPRSATLLSGNNYAAIAPPTYKEYSSSKFINIKSVSGLP
VYGDGVTDDTKNINAILAQYAGCSIIYWPAGTYIVTDTINIPPGTRIFGDAYASAISATG
SNFYNPNSPRAMVKIGNSGDVGVAQISDMLFTVADVLQGCKLLEVNMAGAAPGDVGLWNS
HFRVGGAKGSKVQTNCGGSPAQCKAAWGLLHLTASSSAYIENMWGWVADHDLDGTNGQVI
AVGRGALIEATKATWLVGTGMEHCTLYEYNFWNAKNVYTAMQQSETPYWQGPNGYAAAPA
PWSDNLIASDPQFADCNGDPYCGMAWFERINSGSSNLYLYGGCVWVFFNGGVNKDCSGDN
CQKNAIEIQGATHTYLYGTNVKAVERMIISDGGAAVATRADNGGGWGGVIAAYLFNT

Enzyme Prediction     

No EC number prediction in EKG18993.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	93	833	6e-217	0.9891891891891892

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	8.33e-54	124	356	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	1.94e-06	483	543	11	74	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA21782.1|GH55	0.0	44	834	43	819
BCS06656.1|GH55	1.83e-301	43	837	43	819
BCR94046.1|GH55	1.83e-301	43	837	43	819
EAA60087.1|GH55	8.24e-296	41	836	135	933
CAK47731.1|GH55	2.40e-295	44	837	171	945

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	3.92e-107	97	822	3	742	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	1.53e-106	84	836	7	758	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	2.01e-110	98	822	41	862	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P53626|E13B_TRIHA	4.36e-94	82	833	10	760	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|P49426|EXG1_COCCA	1.08e-91	100	812	48	764	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000236	0.999737	CS pos: 18-19. Pr: 0.9784

TMHMM  Annotations     

There is no transmembrane helices in EKG18993.1.