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CAZyme Information: EKG16971.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Macrophomina phaseolina | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Dothideomycetes; ; Botryosphaeriaceae; Macrophomina; Macrophomina phaseolina | |||||||||||
| CAZyme ID | EKG16971.1 | |||||||||||
| CAZy Family | GH33 | |||||||||||
| CAZyme Description | Glycoside hydrolase family 28 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 61 | 412 | 2.5e-58 | 0.9476923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.10e-25 | 118 | 393 | 48 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 5.34e-20 | 83 | 394 | 111 | 395 | Probable polygalacturonase |
| 215120 | PLN02188 | 1.60e-15 | 129 | 410 | 128 | 390 | polygalacturonase/glycoside hydrolase family protein |
| 178580 | PLN03003 | 6.79e-15 | 129 | 401 | 119 | 365 | Probable polygalacturonase At3g15720 |
| 177865 | PLN02218 | 1.00e-14 | 34 | 393 | 77 | 408 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.22e-232 | 44 | 428 | 16 | 401 | |
| 1.42e-222 | 3 | 428 | 4 | 432 | |
| 1.65e-221 | 1 | 428 | 1 | 432 | |
| 3.39e-219 | 8 | 428 | 11 | 434 | |
| 5.17e-161 | 29 | 420 | 32 | 412 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.05e-28 | 34 | 419 | 25 | 383 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 2.23e-08 | 117 | 390 | 65 | 328 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.05e-144 | 6 | 420 | 11 | 417 | Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2 |
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| 2.04e-71 | 5 | 418 | 11 | 436 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2 |
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| 4.03e-71 | 5 | 409 | 11 | 428 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1 |
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| 5.52e-71 | 24 | 409 | 26 | 427 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1 |
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| 5.52e-71 | 24 | 409 | 26 | 427 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000194 | 0.999794 | CS pos: 17-18. Pr: 0.9731 |