logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EGD88078.1

You are here: Home > Sequence: EGD88078.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichophyton rubrum
Lineage Ascomycota; Eurotiomycetes; ; Arthrodermataceae; Trichophyton; Trichophyton rubrum
CAZyme ID EGD88078.1
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
281 29608.17 4.8699
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TrubrumCBS118892 8713 559305 97 8616
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.132:7

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH75 17 241 7.1e-67 0.9545454545454546

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
399960 Glyco_hydro_75 1.55e-92 82 242 2 165
Fungal chitosanase of glycosyl hydrolase group 75. This family consists of several fungal chitosanase proteins. Chitin, xylan, 6-O-sulphated chitosan and O-carboxymethyl chitin are indigestible by chitosanase. EC:3.2.1.132. The mechanism is likely to be inverting, and the probable catalytic neutrophile base is Asp, with the probable catalytic proton donor being Glu. (see the Chitosanase web-page from CAZY).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.07e-89 19 243 15 233
2.07e-89 19 243 15 233
8.38e-89 19 243 15 233
6.81e-88 10 241 5 231
6.81e-88 10 241 5 231

PDB Hits      help

EGD88078.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.87e-86 14 243 10 240
Endo-chitosanase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=csn PE=3 SV=1
5.16e-85 13 241 5 241
Endo-chitosanase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=csn PE=3 SV=1
5.16e-85 13 241 5 241
Endo-chitosanase OS=Aspergillus oryzae OX=5062 GN=csn PE=1 SV=1
3.31e-79 25 241 20 234
Endo-chitosanase OS=Neosartorya fumigata OX=746128 GN=csn PE=1 SV=1
2.39e-77 1 241 1 237
Endo-chitosanase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=csnB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000196 0.999760 CS pos: 20-21. Pr: 0.9851

TMHMM  Annotations      help

There is no transmembrane helices in EGD88078.1.